Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Gm9172-201ENSMUST00000212092 954 ntBASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-4Q9EQM3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Mir6956-201ENSMUST00000183598 62 ntBASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Gm27321-201ENSMUST00000185021 205 ntBASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-4Q9EQM3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Gm17271-201ENSMUST00000165535 355 ntBASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-4Q9EQM3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Nkx2-4Q9EQM3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-4Q9EQM3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms