Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col4a3bpQ9EQG9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Gm18032-201ENSMUST00000222541 538 ntBASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col4a3bpQ9EQG9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.85■□□□□ 0.61
Col4a3bpQ9EQG9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Actl10-202ENSMUST00000226583 1501 ntBASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Gm7370-201ENSMUST00000219471 767 ntBASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col4a3bpQ9EQG9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col4a3bpQ9EQG9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col4a3bpQ9EQG9 Phf7-203ENSMUST00000226565 1971 ntBASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Gm10013-201ENSMUST00000106074 672 ntBASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col4a3bpQ9EQG9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms