Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssmem1Q9D9Y8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssmem1Q9D9Y8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.21□□□□□ -0.14
Ssmem1Q9D9Y8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ssmem1Q9D9Y8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ssmem1Q9D9Y8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ssmem1Q9D9Y8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ssmem1Q9D9Y8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ssmem1Q9D9Y8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Gm27742-201ENSMUST00000184667 60 ntBASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ssmem1Q9D9Y8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssmem1Q9D9Y8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms