Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Gm26039-201ENSMUST00000158152 144 ntBASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gtf3c6Q9D8P7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Gm6433-201ENSMUST00000118634 875 ntBASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gtf3c6Q9D8P7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gtf3c6Q9D8P7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gtf3c6Q9D8P7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gtf3c6Q9D8P7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms