Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tmem54Q9D7S1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tmem54Q9D7S1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tmem54Q9D7S1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tmem54Q9D7S1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms