Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Gm25318-201ENSMUST00000122554 314 ntBASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Gm45484-201ENSMUST00000210310 1141 ntBASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Rnf225Q9D7D1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf225Q9D7D1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 AC107452.3-201ENSMUST00000228807 1308 ntBASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Dancr-204ENSMUST00000132389 2347 ntBASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf225Q9D7D1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Gm22697-201ENSMUST00000175194 63 ntBASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Gm37866-201ENSMUST00000191950 696 ntBASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Gm37722-201ENSMUST00000193757 208 ntBASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Gm36943-201ENSMUST00000194422 282 ntBASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf225Q9D7D1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf225Q9D7D1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf225Q9D7D1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf225Q9D7D1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf225Q9D7D1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms