Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.55■□□□□ 0.72
Stag1Q9D3E6 AW822252-206ENSMUST00000208904 237 ntBASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Gm7862-201ENSMUST00000121461 292 ntBASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stag1Q9D3E6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44357-201ENSMUST00000195897 142 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm19658-201ENSMUST00000196231 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44367-201ENSMUST00000196836 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44350-201ENSMUST00000197197 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44390-201ENSMUST00000197533 144 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44313-201ENSMUST00000198018 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44486-201ENSMUST00000198508 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44314-201ENSMUST00000199263 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44394-201ENSMUST00000199558 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44484-201ENSMUST00000199873 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44466-201ENSMUST00000200264 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Gm44359-201ENSMUST00000200671 138 ntBASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Stag1Q9D3E6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Stag1Q9D3E6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Stag1Q9D3E6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.52■□□□□ 0.71
Stag1Q9D3E6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Stag1Q9D3E6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Stag1Q9D3E6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms