Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Thumpd2Q9CZB3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Thumpd2Q9CZB3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.26■□□□□ 0.35
Thumpd2Q9CZB3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thumpd2Q9CZB3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thumpd2Q9CZB3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thumpd2Q9CZB3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd2Q9CZB3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd2Q9CZB3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd2Q9CZB3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Thumpd2Q9CZB3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thumpd2Q9CZB3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms