Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Gm11249-201ENSMUST00000117071 859 ntBASIC15.25■□□□□ 0.03
Trim13Q9CYB0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim13Q9CYB0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Gm18025-201ENSMUST00000221733 862 ntBASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim13Q9CYB0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim13Q9CYB0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Gm12896-201ENSMUST00000118430 226 ntBASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Gm12441-201ENSMUST00000121806 588 ntBASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim13Q9CYB0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms