Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssr1Q9CY50 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssr1Q9CY50 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssr1Q9CY50 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ssr1Q9CY50 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Gm38027-201ENSMUST00000192315 235 ntBASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssr1Q9CY50 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.84■□□□□ 0.45
Ssr1Q9CY50 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.84■□□□□ 0.45
Ssr1Q9CY50 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssr1Q9CY50 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssr1Q9CY50 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Gm18958-201ENSMUST00000174258 762 ntBASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Gm8520-201ENSMUST00000186517 868 ntBASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ssr1Q9CY50 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ssr1Q9CY50 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms