Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf135Q9CWS1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf135Q9CWS1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf135Q9CWS1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf135Q9CWS1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Gm18959-201ENSMUST00000208954 655 ntBASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf135Q9CWS1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf135Q9CWS1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf135Q9CWS1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms