Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Mir770-201ENSMUST00000103252 94 ntBASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retreg3Q9CQV4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Gm7284-201ENSMUST00000131667 944 ntBASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retreg3Q9CQV4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Gm9013-201ENSMUST00000132939 882 ntBASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 CT009764.1-201ENSMUST00000222260 483 ntBASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.53■□□□□ 0.24
Retreg3Q9CQV4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Gm5587-201ENSMUST00000206270 674 ntBASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retreg3Q9CQV4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retreg3Q9CQV4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retreg3Q9CQV4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms