Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chchd1Q9CQA6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Gm11421-201ENSMUST00000122124 294 ntBASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chchd1Q9CQA6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chchd1Q9CQA6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.47□□□□□ -0.41
Chchd1Q9CQA6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms