Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mrpl54Q9CPW3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Gm45417-201ENSMUST00000209533 758 ntBASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.65□□□□□ -0.06
Mrpl54Q9CPW3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Mrpl54Q9CPW3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Mrpl54Q9CPW3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Mrpl54Q9CPW3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms