Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.96■□□□□ 0.95
Rtn4Q99P72 AC102523.2-201ENSMUST00000227813 983 ntBASIC20.96■□□□□ 0.95
Rtn4Q99P72 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Rtn4Q99P72 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.95■□□□□ 0.94
Rtn4Q99P72 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.95■□□□□ 0.94
Rtn4Q99P72 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtn4Q99P72 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.94■□□□□ 0.94
Rtn4Q99P72 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.94■□□□□ 0.94
Rtn4Q99P72 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.94■□□□□ 0.94
Rtn4Q99P72 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.93■□□□□ 0.94
Rtn4Q99P72 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.93■□□□□ 0.94
Rtn4Q99P72 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.93■□□□□ 0.94
Rtn4Q99P72 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtn4Q99P72 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC20.92■□□□□ 0.94
Rtn4Q99P72 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.92■□□□□ 0.94
Rtn4Q99P72 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn4Q99P72 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn4Q99P72 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms