Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Gm10819-201ENSMUST00000099988 561 ntBASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gtf2ird2Q99NI3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Ank2-226ENSMUST00000189368 339 ntBASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gtf2ird2Q99NI3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gtf2ird2Q99NI3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.89■□□□□ 0.3
Gtf2ird2Q99NI3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gtf2ird2Q99NI3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gtf2ird2Q99NI3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gtf2ird2Q99NI3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Gm27357-201ENSMUST00000183754 135 ntBASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gtf2ird2Q99NI3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf2ird2Q99NI3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf2ird2Q99NI3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms