Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Mir1668-201ENSMUST00000184114 107 ntBASIC16.04■□□□□ 0.16
Msh4Q99MT2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Msh4Q99MT2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.03■□□□□ 0.16
Msh4Q99MT2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.03■□□□□ 0.16
Msh4Q99MT2 Gm23634-201ENSMUST00000175071 91 ntBASIC16.03■□□□□ 0.16
Msh4Q99MT2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.03■□□□□ 0.16
Msh4Q99MT2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Msh4Q99MT2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh4Q99MT2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh4Q99MT2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Msh4Q99MT2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh4Q99MT2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh4Q99MT2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.02■□□□□ 0.15
Msh4Q99MT2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Msh4Q99MT2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Gm27389-201ENSMUST00000183622 195 ntBASIC16.01■□□□□ 0.15
Msh4Q99MT2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.01■□□□□ 0.15
Msh4Q99MT2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms