Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdca3Q99M54 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.27■□□□□ 0.04
Cdca3Q99M54 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdca3Q99M54 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdca3Q99M54 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdca3Q99M54 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdca3Q99M54 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cdca3Q99M54 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdca3Q99M54 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Gm24841-201ENSMUST00000158676 357 ntBASIC15.26■□□□□ 0.03
Cdca3Q99M54 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Mir1668-201ENSMUST00000184114 107 ntBASIC15.26■□□□□ 0.03
Cdca3Q99M54 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdca3Q99M54 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.25■□□□□ 0.03
Cdca3Q99M54 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.25■□□□□ 0.03
Cdca3Q99M54 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.25■□□□□ 0.03
Cdca3Q99M54 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdca3Q99M54 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Gm18958-201ENSMUST00000174258 762 ntBASIC15.24■□□□□ 0.03
Cdca3Q99M54 Gm7213-201ENSMUST00000215977 950 ntBASIC15.24■□□□□ 0.03
Cdca3Q99M54 Gm7370-201ENSMUST00000219471 767 ntBASIC15.24■□□□□ 0.03
Cdca3Q99M54 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.24■□□□□ 0.03
Cdca3Q99M54 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdca3Q99M54 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdca3Q99M54 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms