Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Gm18101-201ENSMUST00000215769 548 ntBASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb1Q91Y08 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Gm18032-201ENSMUST00000222541 538 ntBASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb1Q91Y08 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Gm13836-201ENSMUST00000121159 501 ntBASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb1Q91Y08 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Gm9987-201ENSMUST00000069768 567 ntBASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb1Q91Y08 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb1Q91Y08 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb1Q91Y08 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms