Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb2Q91Y00 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.47■□□□□ 0.39
Pcdhb2Q91Y00 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb2Q91Y00 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb2Q91Y00 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb2Q91Y00 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb2Q91Y00 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb2Q91Y00 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb2Q91Y00 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms