Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb22Q91XZ8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Gm44430-201ENSMUST00000203376 995 ntBASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb22Q91XZ8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb22Q91XZ8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Gm33142-201ENSMUST00000193913 867 ntBASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb22Q91XZ8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb22Q91XZ8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Gm15794-201ENSMUST00000120182 631 ntBASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb22Q91XZ8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms