Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Gm11355-201ENSMUST00000121120 306 ntBASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb6Q91XZ4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb6Q91XZ4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb6Q91XZ4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Gm10013-201ENSMUST00000106074 672 ntBASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb6Q91XZ4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb6Q91XZ4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb6Q91XZ4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb6Q91XZ4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb6Q91XZ4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms