Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Gm7213-201ENSMUST00000215977 950 ntBASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhb8Q91XZ2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb8Q91XZ2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Gm10252-201ENSMUST00000209541 832 ntBASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb8Q91XZ2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb8Q91XZ2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms