Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb4Q91XX6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb4Q91XX6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb4Q91XX6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb4Q91XX6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb4Q91XX6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Gm16061-201ENSMUST00000122167 857 ntBASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Gm7889-201ENSMUST00000185591 958 ntBASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Gm7213-201ENSMUST00000215977 950 ntBASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb4Q91XX6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb4Q91XX6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb4Q91XX6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gm43930-201ENSMUST00000203868 845 ntBASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Pcdhgb4Q91XX6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms