Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb5Q91XX5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhgb5Q91XX5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhgb5Q91XX5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhgb5Q91XX5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhgb5Q91XX5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhgb5Q91XX5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms