Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.76■□□□□ 0.27
Lims2Q91XD2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.76■□□□□ 0.27
Lims2Q91XD2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lims2Q91XD2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lims2Q91XD2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lims2Q91XD2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.73■□□□□ 0.27
Lims2Q91XD2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lims2Q91XD2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lims2Q91XD2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lims2Q91XD2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lims2Q91XD2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Lims2Q91XD2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lims2Q91XD2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.72■□□□□ 0.27
Lims2Q91XD2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lims2Q91XD2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms