Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Rprl3-201ENSMUST00000157400 290 ntBASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3d19Q91X43 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Gm7153-201ENSMUST00000117092 455 ntBASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Birc2-201ENSMUST00000054878 378 ntBASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Sh3d19Q91X43 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3d19Q91X43 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh3d19Q91X43 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Sh3d19Q91X43 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3d19Q91X43 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Sh3d19Q91X43 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3d19Q91X43 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3d19Q91X43 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3d19Q91X43 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Gm24589-201ENSMUST00000116692 94 ntBASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3d19Q91X43 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms