Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx9Q91VH2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx9Q91VH2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx9Q91VH2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.3■□□□□ 0.36
Snx9Q91VH2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx9Q91VH2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Snx9Q91VH2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.29■□□□□ 0.36
Snx9Q91VH2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.29■□□□□ 0.36
Snx9Q91VH2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx9Q91VH2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.28■□□□□ 0.36
Snx9Q91VH2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.28■□□□□ 0.36
Snx9Q91VH2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.28■□□□□ 0.36
Snx9Q91VH2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.28■□□□□ 0.36
Snx9Q91VH2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx9Q91VH2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Gm17807-201ENSMUST00000186869 298 ntBASIC17.27■□□□□ 0.36
Snx9Q91VH2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx9Q91VH2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx9Q91VH2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx9Q91VH2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Snx9Q91VH2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx9Q91VH2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx9Q91VH2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.26■□□□□ 0.35
Snx9Q91VH2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.26■□□□□ 0.35
Snx9Q91VH2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx9Q91VH2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.25■□□□□ 0.35
Snx9Q91VH2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx9Q91VH2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx9Q91VH2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx9Q91VH2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.25■□□□□ 0.35
Snx9Q91VH2 Mir3081-201ENSMUST00000175305 84 ntBASIC17.25■□□□□ 0.35
Snx9Q91VH2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms