Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Gm2274-201ENSMUST00000184539 609 ntBASIC13.8□□□□□ -0.2
H1fooQ8VIK3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.79□□□□□ -0.2
H1fooQ8VIK3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Gm7370-201ENSMUST00000219471 767 ntBASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H1fooQ8VIK3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H1fooQ8VIK3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
H1fooQ8VIK3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Gm11539-201ENSMUST00000119837 557 ntBASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Gm13436-201ENSMUST00000120418 567 ntBASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Gm13474-201ENSMUST00000122466 815 ntBASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H1fooQ8VIK3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H1fooQ8VIK3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms