Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Pcdh18Q8VHR0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Asic1-205ENSMUST00000228185 1818 ntBASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh18Q8VHR0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh18Q8VHR0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Trmt13-210ENSMUST00000198454 880 ntBASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh18Q8VHR0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Gm12382-201ENSMUST00000122005 922 ntBASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Gm37856-201ENSMUST00000191634 999 ntBASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh18Q8VHR0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms