Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Gm13148-201ENSMUST00000118892 745 ntBASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Gm17661-201ENSMUST00000170317 270 ntBASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Rab40cQ8VHQ4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Gm24841-201ENSMUST00000158676 357 ntBASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab40cQ8VHQ4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Gm37025-201ENSMUST00000195159 829 ntBASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40cQ8VHQ4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms