Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps4aQ8VEJ9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps4aQ8VEJ9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vps4aQ8VEJ9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Vps4aQ8VEJ9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps4aQ8VEJ9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Vps4aQ8VEJ9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.96■□□□□ 0.14
Vps4aQ8VEJ9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gm22697-201ENSMUST00000175194 63 ntBASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4aQ8VEJ9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps4aQ8VEJ9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vps4aQ8VEJ9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4aQ8VEJ9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms