Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 AA543401-201ENSMUST00000164248 1269 ntBASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Gm17271-201ENSMUST00000165535 355 ntBASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lmcd1Q8VEE1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lmcd1Q8VEE1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lmcd1Q8VEE1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lmcd1Q8VEE1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Gm13616-201ENSMUST00000120600 222 ntBASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lmcd1Q8VEE1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lmcd1Q8VEE1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms