Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rprd1aQ8VDS4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Gm27704-201ENSMUST00000185094 107 ntBASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Gm45328-201ENSMUST00000210942 917 ntBASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rprd1aQ8VDS4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rprd1aQ8VDS4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rprd1aQ8VDS4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rprd1aQ8VDS4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rprd1aQ8VDS4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms