Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Gm18115-201ENSMUST00000221209 621 ntBASIC15.78■□□□□ 0.12
Lsm1Q8VC85 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm1Q8VC85 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm1Q8VC85 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm1Q8VC85 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Gm27011-201ENSMUST00000182352 972 ntBASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm1Q8VC85 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Gm44450-201ENSMUST00000199528 114 ntBASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm1Q8VC85 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm1Q8VC85 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms