Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc9Q8VC31 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc9Q8VC31 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc9Q8VC31 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc9Q8VC31 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Mir8112-201ENSMUST00000184382 131 ntBASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc9Q8VC31 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc9Q8VC31 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Gm38042-201ENSMUST00000191614 5208 ntBASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Gm43399-201ENSMUST00000202546 2374 ntBASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.83■□□□□ 0.77
Ccdc9Q8VC31 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms