Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chrna3Q8R4G9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Gm17807-201ENSMUST00000186869 298 ntBASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chrna3Q8R4G9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Gm9103-201ENSMUST00000119371 405 ntBASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chrna3Q8R4G9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Gm15794-201ENSMUST00000120182 631 ntBASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna3Q8R4G9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms