Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfc3Q8R323 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfc3Q8R323 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.2■□□□□ 0.02
Rfc3Q8R323 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfc3Q8R323 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfc3Q8R323 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Gm27741-201ENSMUST00000185060 237 ntBASIC15.18■□□□□ 0.02
Rfc3Q8R323 Gm17807-201ENSMUST00000186869 298 ntBASIC15.18■□□□□ 0.02
Rfc3Q8R323 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.18■□□□□ 0.02
Rfc3Q8R323 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfc3Q8R323 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Phf7-203ENSMUST00000226565 1971 ntBASIC15.17■□□□□ 0.02
Rfc3Q8R323 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.17■□□□□ 0.02
Rfc3Q8R323 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.17■□□□□ 0.02
Rfc3Q8R323 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc3Q8R323 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms