Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vmn1r28Q8R2C9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vmn1r28Q8R2C9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vmn1r28Q8R2C9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Gm7284-201ENSMUST00000131667 944 ntBASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Gm7367-201ENSMUST00000057611 492 ntBASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vmn1r28Q8R2C9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.11■□□□□ 0.01
Vmn1r28Q8R2C9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vmn1r28Q8R2C9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vmn1r28Q8R2C9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vmn1r28Q8R2C9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Vmn1r28Q8R2C9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms