Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp7Q8R1T1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp7Q8R1T1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Chmp7Q8R1T1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Gm4535-201ENSMUST00000182274 558 ntBASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Gm10355-201ENSMUST00000097146 517 ntBASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp7Q8R1T1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21■□□□□ 0.95
Chmp7Q8R1T1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Gm25990-201ENSMUST00000102440 86 ntBASIC21■□□□□ 0.95
Chmp7Q8R1T1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Gm13418-201ENSMUST00000119097 944 ntBASIC21■□□□□ 0.95
Chmp7Q8R1T1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp7Q8R1T1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp7Q8R1T1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Mir5126-201ENSMUST00000175513 77 ntBASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Chmp7Q8R1T1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms