Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Gm27646-201ENSMUST00000183989 110 ntBASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ddx54Q8K4L0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Gm27300-201ENSMUST00000184085 97 ntBASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Gm27335-201ENSMUST00000184758 97 ntBASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Gm45167-201ENSMUST00000208007 322 ntBASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ddx54Q8K4L0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Gm25406-201ENSMUST00000157599 105 ntBASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Gm44492-201ENSMUST00000197012 141 ntBASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx54Q8K4L0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.46■■□□□ 1.03
Ddx54Q8K4L0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Ddx54Q8K4L0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 AC159295.1-201ENSMUST00000225326 940 ntBASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx54Q8K4L0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx54Q8K4L0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx54Q8K4L0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms