Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Gm18666-201ENSMUST00000190039 958 ntBASIC10.37□□□□□ -0.75
Cystm1Q8K353 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Dio3-201ENSMUST00000097228 1449 ntBASIC10.37□□□□□ -0.75
Cystm1Q8K353 Gm10812-201ENSMUST00000099864 546 ntBASIC10.37□□□□□ -0.75
Cystm1Q8K353 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.36□□□□□ -0.75
Cystm1Q8K353 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.36□□□□□ -0.75
Cystm1Q8K353 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.36□□□□□ -0.75
Cystm1Q8K353 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.36□□□□□ -0.75
Cystm1Q8K353 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cystm1Q8K353 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cystm1Q8K353 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 391 ms