Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rtn1Q8K0T0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Gm6623-201ENSMUST00000173570 544 ntBASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn1Q8K0T0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rtn1Q8K0T0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtn1Q8K0T0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Gm17808-201ENSMUST00000200859 894 ntBASIC18.95■□□□□ 0.62
Rtn1Q8K0T0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms