Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgcs1Q8JZK9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Gm5417-201ENSMUST00000079706 384 ntBASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hmgcs1Q8JZK9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Phf7-203ENSMUST00000226565 1971 ntBASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgcs1Q8JZK9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgcs1Q8JZK9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Hmgcs1Q8JZK9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgcs1Q8JZK9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgcs1Q8JZK9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgcs1Q8JZK9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgcs1Q8JZK9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Hmgcs1Q8JZK9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hmgcs1Q8JZK9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgcs1Q8JZK9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms