Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Syne4Q8CII8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.6■□□□□ 0.57
Syne4Q8CII8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Gm9172-201ENSMUST00000212092 954 ntBASIC18.6■□□□□ 0.57
Syne4Q8CII8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Syne4Q8CII8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syne4Q8CII8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.58■□□□□ 0.57
Syne4Q8CII8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Syne4Q8CII8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.58■□□□□ 0.56
Syne4Q8CII8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Syne4Q8CII8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.57■□□□□ 0.56
Syne4Q8CII8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.57■□□□□ 0.56
Syne4Q8CII8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syne4Q8CII8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Gm25911-201ENSMUST00000157621 56 ntBASIC18.56■□□□□ 0.56
Syne4Q8CII8 Gm26308-201ENSMUST00000157768 69 ntBASIC18.56■□□□□ 0.56
Syne4Q8CII8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.56■□□□□ 0.56
Syne4Q8CII8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.56■□□□□ 0.56
Syne4Q8CII8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.56■□□□□ 0.56
Syne4Q8CII8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.56■□□□□ 0.56
Syne4Q8CII8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syne4Q8CII8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.55■□□□□ 0.56
Syne4Q8CII8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syne4Q8CII8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms