Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.61■□□□□ 0.25
Clip4Q8CI96 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clip4Q8CI96 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Clip4Q8CI96 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clip4Q8CI96 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clip4Q8CI96 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clip4Q8CI96 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.58■□□□□ 0.25
Clip4Q8CI96 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.58■□□□□ 0.25
Clip4Q8CI96 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clip4Q8CI96 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Gm13474-201ENSMUST00000122466 815 ntBASIC16.58■□□□□ 0.24
Clip4Q8CI96 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.58■□□□□ 0.24
Clip4Q8CI96 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.58■□□□□ 0.24
Clip4Q8CI96 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clip4Q8CI96 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.57■□□□□ 0.24
Clip4Q8CI96 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms