Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.53■□□□□ 0.24
Pcdhb7Q8CDY9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb7Q8CDY9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb7Q8CDY9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb7Q8CDY9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb7Q8CDY9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb7Q8CDY9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb7Q8CDY9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms