Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Gm4459-201ENSMUST00000118750 468 ntBASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap54Q8C6S9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Cfap54Q8C6S9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.71■□□□□ 0.11
Cfap54Q8C6S9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap54Q8C6S9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Cfap54Q8C6S9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Cfap54Q8C6S9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cfap54Q8C6S9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cfap54Q8C6S9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.69■□□□□ 0.1
Cfap54Q8C6S9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms