Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a6Q8C6K9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a6Q8C6K9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Gm9172-201ENSMUST00000212092 954 ntBASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a6Q8C6K9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a6Q8C6K9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col6a6Q8C6K9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a6Q8C6K9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.76□□□□□ -0.05
Col6a6Q8C6K9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a6Q8C6K9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms