Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Gm10653-202ENSMUST00000139570 835 ntBASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Gm27011-201ENSMUST00000182352 972 ntBASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Trmt13-210ENSMUST00000198454 880 ntBASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tsen54Q8C2A2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tsen54Q8C2A2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tsen54Q8C2A2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Gm27275-201ENSMUST00000184318 272 ntBASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tsen54Q8C2A2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms